dipy logo

Site Navigation

NIPY Community

Previous topic

Release notes for DIPY version 0.8

Next topic

Release notes for DIPY version 0.6

Release notes for DIPY version 0.7ΒΆ

GitHub stats for 2013/03/29 - 2013/12/23 (tag: 0.6.0)

The following 16 authors contributed 814 commits.

  • Ariel Rokem
  • Bago Amirbekian
  • Eleftherios Garyfallidis
  • Emmanuel Caruyer
  • Erik Ziegler
  • Gabriel Girard
  • Jean-Christophe Houde
  • Kimberly Chan
  • Matthew Brett
  • Matthias Ekman
  • Matthieu Dumont
  • Mauro Zucchelli
  • Maxime Descoteaux
  • Samuel St-Jean
  • Stefan van der Walt
  • Sylvain Merlet

We closed a total of 84 pull requests; this is the full list (generated with the script tools/github_stats.py):

Pull Requests (84):

  • PR #292: Streamline tools
  • PR #289: Examples checked for peaks_from_model
  • PR #288: Link shore examples
  • PR #279: Update release 0.7 examples’ system
  • PR #257: Continuous modelling: SHORE
  • PR #285: Bad seeds cause segfault in EuDX
  • PR #274: Peak directions update
  • PR #275: Restore example
  • PR #261: R2 term response function for Sharpening Deconvolution Transform (SDT)
  • PR #273: Fixed typos + autopep8
  • PR #268: Add gfa shmfit
  • PR #260: NF: Command line interface to QuickBundles.
  • PR #270: Removed minmax_normalize from dipy.reconst.peaks
  • PR #247: Model base
  • PR #267: Refactoring peaks_from_model_parallel
  • PR #219: Update forward sdeconv mat
  • PR #266: BF - join pool before trying to delete temp directory
  • PR #265: Peak from model issue #253
  • PR #264: peak_from_model tmp files
  • PR #263: Refactoring peaks calculations to be out of odf.py
  • PR #262: Handle cpu count exception
  • PR #255: Fix peaks_from_model_parallel
  • PR #259: Release 0.7 a few cleanups
  • PR #252: Clean cc
  • PR #243: NF Added norm input to interp_rbf and angle as an alternative norm.
  • PR #251: Another cleanup for fvtk. This time the slicer function was simplified
  • PR #249: Dsi metrics 2
  • PR #239: Segmentation based on rgb threshold + examples
  • PR #240: Dsi metrics
  • PR #245: Fix some rewording
  • PR #242: A new streamtube visualization method and different fixes and cleanups for the fvtk module
  • PR #237: WIP: cleanup docs / small refactor for median otsu
  • PR #221: peaks_from_model now return peaks directions
  • PR #234: BF: predict for cases when the ADC is multi-D and S0 is provided as a volume
  • PR #232: Fix peak extraction default value of relative_peak_threshold
  • PR #227: Fix closing upon download completion in fetcher
  • PR #230: Tensor predict
  • PR #229: BF: input.dtype is used per default
  • PR #210: Brainextraction
  • PR #226: SetInput in vtk5 is now SetInputData in vtk6
  • PR #225: fixed typo
  • PR #212: Tensor visualization
  • PR #223: Fix make examples for windows.
  • PR #222: Fix restore bug
  • PR #217: RF - update csdeconv to use SphHarmFit class to reduce code duplication.
  • PR #208: Shm coefficients in peaks_from_model
  • PR #216: BF - fixed mask_voxel_size bug and added test. Replaced promote_dtype wi...
  • PR #211: Added a md5 check to each dataset.
  • PR #54: Restore
  • PR #213: Update to a more recent version of six.py.
  • PR #204: Maxime’s [Gallery] Reconst DTI example revisited
  • PR #207: Added two new datasets online and updated fetcher.py.
  • PR #209: Fixed typos in reconst/dti.py
  • PR #206: DOC: update the docs to say that we support python 3
  • PR #205: RF: Minor corrections in index.rst and CSD example
  • PR #173: Constrained Spherical Deconvolution and the Spherical Deconvolution Transform
  • PR #203: RF: Rename tensor statistics to remove “tensor_” from them.
  • PR #202: Typos
  • PR #201: Bago’s Rename sph basis functions corrected after rebasing and other minor lateral fixes
  • PR #191: DOC - clarify docs for SphHarmModel
  • PR #199: FIX: testfail due to Non-ASCII character xe2 in markov.py
  • PR #189: Shm small fixes
  • PR #196: DOC: add reference section to ProbabilisticOdfWeightedTracker
  • PR #190: BF - fix fit-tensor handling of file extensions and mask=none
  • PR #182: RF - fix disperse_charges so that a large constant does not cause the po...
  • PR #183: OPT: Modified dipy.core.sphere_stats.random_uniform_on_sphere, cf issue #181
  • PR #185: DOC: replace soureforge.net links with nipy.org
  • PR #180: BF: fix Cython TypeError from negative indices to tuples
  • PR #179: BF: doctest output difference workarounds
  • PR #176: MRG: Py3 compat
  • PR #178: RF: This function is superseded by read_bvals_bvecs.
  • PR #170: Westin stats
  • PR #174: RF: use $PYTHON variable for python invocation
  • PR #172: DOC: Updated index.rst and refactored example segment_quickbundles.py
  • PR #169: RF: refactor pyx / c file stamping for packaging
  • PR #168: DOC: more updates to release notes
  • PR #167: Merge maint
  • PR #166: BF: pyc and created trk files were in eg archive
  • PR #160: NF: add script to build dmgs from buildbot mpkgs
  • PR #164: Calculation for mode of a tensor
  • PR #163: Remove dti tensor
  • PR #161: DOC: typo in the probabilistic tracking example.
  • PR #162: DOC: update release notes
  • PR #159: Rename install test scripts