Specification File Tags
Hemisphere Flag
- hem_flag - denotes hemisphere, valid values are left and
right.
Volume File Tags
- volume_functional_file - a functional volume file.
- volume_paint_file - a paint (ROI) volume file.
- volume_prob_atlas_file - a probabilistic atlas volume file.
- volume_rgb_file - an RGB volume file.
- volume_segmentation_file - a segmentation volume file.
- volume_anatomy_file - an anatomical volume file.
Topology File Tags
- CLOSEDtopo_file - file is a closed topology file.
- OPENtopo_file - file is an open topology file.
- CUTtopo_file - file is a cut topology file.
- LOBAR_CUTtopo_file - file is a lobar cut topology file.
- topo_file - topology file of unknown type. Need to use
topo_flag.
- topo_flag - if topo_file tag is used, this tag should be used to
indicate OPEN or CLOSED topology.
Coordinate File Tags
- RAWcoord_file - file is a raw coordinate file.
- FIDUCIALcoord_file - file is fiducial coordinate file.
- INFLATEDcoord_file - file is an inflated coordinate file.
- VERY_INFLATEDcoord_file - a highly inflated coordinate file.
- SPHERICALcoord_file - file is a spherical coordinate file.
- ELLIPSOIDcoord_file - file is an ellipsoidal coordinate file.
- COMPRESSED_MEDIAL_WALLcoord_file - file is a compressed medial
wall
file.
- FLATcoord_file - file is a flat coordinate file.
- LOBAR_FLATcoord_file - a lobar cut flat coordinate file.
- coord_file - file is an unknown coordinate file.
Paint File Tags
- area_color_file - file is an area color file.
- areal_estimation_file - file is an areal estimation file.
- paint_file - file is a paint file.
- RGBpaint_file - file is an RGB paint file.
Border File Tags
- RAWborder_file - border file is associated with a raw coordinate
file.
- FIDUCIALborder_file - border file is associated with a fiducial
coordinate file.
- INFLATEDborder_file - border file is associated with a inflated
coordinate file.
- SPHERICALborder_file - border file is associated with a
spherical
coordinate file.
- ELLIPSOIDborder_file - border file is associated with a
ellipsoidal
coordinate file.
- COMPRESSED_MEDIAL_WALLborder_file - border file is associated
with
a compressed medial wall coordinate file.
- FLATborder_file - border file is associated with a flat
coordinate
file.
- LOBAR_FLATborder_file - border file for a lobar cut flat
coordinate
file.
- VOLUMEborder_file - borders for volume.
- border_file - border file is of unknown type.
- border_color_file - file is a border color file.
- borderproj_file - file is a border projection file.
- momc_template_file - file is a MOMC template file.
- momc_template_match_file - file is MOMC template match file.
Cell File Tags
- cell_file - file is a cell file.
- cell_color_file - file is a cell color file.
- cellproj_file - file is a cell projection file.
Foci File Tags
- foci_filter_flag - valid values are left and right.
- foci_file - file is a foci file.
- foci_color_file - file is a foci color file.
- fociproj_file - file is foci projection file.
Other File Tags
- areal_estimation_file - file is an areal estimation file.
- atlas_file - file is a probabilistic atlas file.
- CEREBRAL_HULLvtk_file - file containing the cerebral hull for a
surface.
- cocomac_connect_file - CoCoMac
Connectivity data file.
- deform_field_file - deformation field (vectors) file.
- deform_map_file - deformation map file.
- geodesic_distance_file - geodesic distance file.
- lat_lon_file - latitude/longitude file
- metric_file - file is metric file.
- cuts_file - file is cuts file.
- palette_file - file is a color palette file for mapping metric
values
to colors.
- params_file - specifies SureFit params file.
- surface_shape_file - specifies a surface shape file.
- topography_file - specifies a visual topography file.
- comment_file - specifies a user's comment file.
- coord_transform_file - specifies a Transformation Matrix file
for
use with the REF or AUX coord file.
- vtk_model_file - file for a VTK polydata model file.
- volume_comm_transform_file - a Transformation Matrix file
specifically for use with communicating with a volume program.
- wustl_region_file - file for WUSTL regions.